Artificial Gene Regulatory Networks


Resources


  • GRGEN: A C++ AGRN implementation featuring a number of different dynamics equations, with usage examples in seacells and LALA.
  • pyGRN: A python AGRN implementation, including a GPU-based AGRN and a differentiable AGRN using Tensorflow. The differentiable AGRN is also implemented as a Keras layer for use in deep learning tasks.
  • AGRN.jl: A Julia AGRN implementation which is currently under development.